Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-methionine transport system permease protein | SAMN04487831_102332 | Not Available | Positive | 1011494 - 1012153 | 23613.7 |
| d-methionine transport system substrate-binding protein | SAMN04487831_102333 | Not Available | Positive | 1012200 - 1013075 | 31106.0 |
| methyl-accepting chemotaxis protein | SAMN04487831_102334 | Not Available | Positive | 1013263 - 1015317 | 72907.9 |
| signal transduction histidine kinase | SAMN04487831_102335 | Not Available | Negative | 1015354 - 1016727 | 52550.5 |
| dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domain | SAMN04487831_102336 | Not Available | Negative | 1016724 - 1017434 | 26953.6 |
| multidrug resistance efflux pump | SAMN04487831_102337 | Not Available | Positive | 1017617 - 1019143 | 54807.3 |
| putative abc transport system atp-binding protein | SAMN04487831_102338 | Not Available | Positive | 1019136 - 1019882 | 27475.2 |
| putative abc transport system permease protein | SAMN04487831_102339 | Not Available | Positive | 1019876 - 1021132 | 45445.3 |
| cysteine desulfurase | SAMN04487831_102340 | Not Available | Positive | 1021261 - 1022466 | 43271.5 |
| nitrogen fixation protein nifu | SAMN04487831_102341 | Not Available | Positive | 1022498 - 1022932 | 15759.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
