Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 6-phospho-beta-glucosidase | SAMN04487831_102312 | Not Available | Positive | 988800 - 990236 | 54485.1 |
| long-chain acyl-coa synthetase | SAMN04487831_102313 | Not Available | Negative | 990291 - 991691 | 51688.6 |
| transcriptional regulator, badm/rrf2 family | SAMN04487831_102314 | Not Available | Negative | 991794 - 992195 | 15132.3 |
| regulatory protein, laci family | SAMN04487831_102315 | Not Available | Negative | 992267 - 993067 | 29916.8 |
| listeria/bacterioides repeat-containing protein | SAMN04487831_102316 | Not Available | Positive | 993223 - 994017 | 29598.7 |
| glycosidase | SAMN04487831_102317 | Not Available | Positive | 994029 - 995660 | 63654.4 |
| arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein | SAMN04487831_102318 | Not Available | Positive | 995673 - 997130 | 53902.7 |
| arabinogalactan oligomer / maltooligosaccharide transport system permease protein | SAMN04487831_102319 | Not Available | Positive | 997142 - 998461 | 48877.0 |
| arabinogalactan oligomer / maltooligosaccharide transport system permease protein | SAMN04487831_102320 | Not Available | Positive | 998458 - 999297 | 31424.1 |
| aminoglycoside 3-n-acetyltransferase | SAMN04487831_102321 | Not Available | Positive | 999313 - 1000101 | 29449.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
