Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gntr family transcriptional regulator / mocr family aminotransferase | SAMN04487831_102252 | Not Available | Positive | 922255 - 923559 | 49952.1 |
| polar amino acid transport system substrate-binding protein | SAMN04487831_102253 | Not Available | Positive | 923623 - 924459 | 29258.2 |
| polar amino acid transport system permease protein | SAMN04487831_102254 | Not Available | Positive | 924475 - 925131 | 24546.7 |
| polar amino acid transport system atp-binding protein | SAMN04487831_102255 | Not Available | Positive | 925143 - 925895 | 27884.5 |
| sodium/proline symporter | SAMN04487831_102256 | Not Available | Positive | 925915 - 927429 | 53946.2 |
| eal domain, c-di-gmp-specific phosphodiesterase class i (or its enzymatically inactive variant) | SAMN04487831_102257 | Not Available | Negative | 927486 - 929387 | 73631.6 |
| putative efflux protein, mate family | SAMN04487831_102258 | Not Available | Positive | 929621 - 930991 | 49798.6 |
| right handed beta helix region | SAMN04487831_102259 | Not Available | Negative | 931010 - 933010 | 74867.0 |
| eal domain, c-di-gmp-specific phosphodiesterase class i (or its enzymatically inactive variant) | SAMN04487831_102260 | Not Available | Negative | 933108 - 935303 | 83166.3 |
| neurotransmitter:na+ symporter, nss family | SAMN04487831_102261 | Not Available | Positive | 935476 - 936846 | 50055.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
