Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bile acid:na+ symporter, bass family | SAMN04487831_102242 | Not Available | Negative | 912789 - 913763 | 34519.6 |
| d-alanyl-d-alanine carboxypeptidase | SAMN04487831_102243 | Not Available | Positive | 913907 - 914659 | 28793.6 |
| surface polysaccharide o-acyltransferase, integral membrane enzyme | SAMN04487831_102244 | Not Available | Positive | 914674 - 915891 | 46630.5 |
| dnaj domain-containing protein | SAMN04487831_102245 | Not Available | Negative | 916011 - 916433 | 16717.2 |
| hypothetical protein | SAMN04487831_102246 | Not Available | Negative | 916430 - 917287 | 33129.7 |
| hypothetical protein | SAMN04487831_102247 | Not Available | Negative | 917292 - 917729 | 17372.9 |
| iron (metal) dependent repressor, dtxr family | SAMN04487831_102248 | Not Available | Positive | 917978 - 918358 | 14328.3 |
| fur family transcriptional regulator, ferric uptake regulator | SAMN04487831_102249 | Not Available | Positive | 918361 - 918828 | 17345.8 |
| aspartyl-trna synthetase | SAMN04487831_102250 | Not Available | Positive | 918902 - 920665 | 65382.5 |
| uncharacterized membrane protein | SAMN04487831_102251 | Not Available | Negative | 921574 - 922134 | 19459.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
