Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gtp-binding protein | SAMN04487831_102212 | Not Available | Positive | 878384 - 879004 | 22982.5 |
| zinc transport system substrate-binding protein | SAMN04487831_102213 | Not Available | Positive | 879006 - 879995 | 37097.4 |
| zinc transport system atp-binding protein | SAMN04487831_102214 | Not Available | Positive | 880106 - 880849 | 27232.1 |
| zinc transport system permease protein | SAMN04487831_102215 | Not Available | Positive | 880842 - 881633 | 28513.9 |
| hypothetical protein | SAMN04487831_102216 | Not Available | Positive | 881817 - 882857 | 39156.2 |
| flagellin | SAMN04487831_102217 | Not Available | Positive | 883258 - 884739 | 51963.3 |
| flagellin | SAMN04487831_102218 | Not Available | Positive | 885328 - 886839 | 52555.3 |
| flagellin | SAMN04487831_102219 | Not Available | Positive | 887239 - 888771 | 53131.3 |
| adenine phosphoribosyltransferase | SAMN04487831_102220 | Not Available | Positive | 888965 - 889489 | 19000.1 |
| pp_00796 | SAMN04487831_102221 | Not Available | Positive | 889513 - 890214 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
