Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| imp dehydrogenase | SAMN04487831_102202 | Not Available | Negative | 859888 - 861345 | 51877.0 |
| pyruvate-ferredoxin/flavodoxin oxidoreductase | SAMN04487831_102203 | Not Available | Positive | 861703 - 865236 | 128052.0 |
| transcriptional repressor nrdr | SAMN04487831_102204 | Not Available | Positive | 865368 - 865820 | 17348.8 |
| hypothetical protein | SAMN04487831_102205 | Not Available | Positive | 865921 - 866229 | 10864.8 |
| glycosyl hydrolases family 43 | SAMN04487831_102206 | Not Available | Positive | 866472 - 873821 | 270278.0 |
| hypothetical protein | SAMN04487831_102207 | Not Available | Positive | 873894 - 874433 | 20758.2 |
| ribose 5-phosphate isomerase b | SAMN04487831_102208 | Not Available | Positive | 874430 - 874876 | 15930.2 |
| trigger factor | SAMN04487831_102209 | Not Available | Positive | 874969 - 876312 | 49902.9 |
| atp-dependent clp protease, protease subunit | SAMN04487831_102210 | Not Available | Positive | 876457 - 877041 | 21414.8 |
| atp-dependent clp protease atp-binding subunit clpx | SAMN04487831_102211 | Not Available | Positive | 877095 - 878384 | 47579.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
