Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| threonine-phosphate decarboxylase | SAMN04487831_10171 | Not Available | Negative | 65562 - 66650 | 41413.7 |
| hypothetical protein | SAMN04487831_10172 | Not Available | Positive | 66821 - 70354 | 137418.0 |
| hypothetical protein | SAMN04487831_10173 | Not Available | Positive | 70363 - 71598 | 46445.6 |
| hypothetical protein | SAMN04487831_10174 | Not Available | Positive | 71605 - 72438 | 31695.9 |
| hypothetical protein | SAMN04487831_10175 | Not Available | Positive | 72466 - 73671 | 47454.1 |
| mfs transporter, ppp family, 3-phenylpropionic acid transporter | SAMN04487831_10176 | Not Available | Positive | 73685 - 74917 | 45309.7 |
| hypothetical protein | SAMN04487831_10177 | Not Available | Positive | 74990 - 75727 | 27650.2 |
| dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domain | SAMN04487831_10178 | Not Available | Positive | 75757 - 76446 | 26072.2 |
| signal transduction histidine kinase | SAMN04487831_10179 | Not Available | Positive | 76568 - 77935 | 52237.5 |
| hypothetical protein | SAMN04487831_10180 | Not Available | Positive | 78019 - 78813 | 28718.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
