Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-n-arabinofuranosidase | SAMN04487831_102192 | Not Available | Positive | 842877 - 844427 | 58102.5 |
| two-component system, sensor histidine kinase yesm | SAMN04487831_102193 | Not Available | Positive | 844508 - 846052 | 59575.4 |
| two-component system, response regulator yesn | SAMN04487831_102194 | Not Available | Positive | 846055 - 847635 | 60494.4 |
| putative aldouronate transport system substrate-binding protein | SAMN04487831_102195 | Not Available | Positive | 847779 - 849452 | 62747.0 |
| putative aldouronate transport system permease protein | SAMN04487831_102196 | Not Available | Positive | 849546 - 850463 | 34094.4 |
| putative aldouronate transport system permease protein | SAMN04487831_102197 | Not Available | Positive | 850476 - 851432 | 35039.4 |
| oligosaccharide reducing-end xylanase | SAMN04487831_102198 | Not Available | Positive | 851454 - 852578 | 43268.6 |
| phosphoglucomutase | SAMN04487831_102199 | Not Available | Positive | 852682 - 854376 | 63213.7 |
| beta-glucosidase | SAMN04487831_102200 | Not Available | Positive | 854482 - 857295 | 104175.0 |
| methyl-accepting chemotaxis protein | SAMN04487831_102201 | Not Available | Positive | 857472 - 859238 | 64721.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
