Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diguanylate cyclase (ggdef) domain-containing protein | SAMN04487831_102182 | Not Available | Positive | 831018 - 832154 | 43624.2 |
| helix-turn-helix | SAMN04487831_102183 | Not Available | Positive | 832247 - 832591 | 12683.5 |
| acetyl esterase/lipase | SAMN04487831_102184 | Not Available | Positive | 832686 - 833615 | 34733.2 |
| dna-binding transcriptional regulator, gntr family | SAMN04487831_102185 | Not Available | Positive | 833745 - 834431 | 26653.1 |
| putative aldouronate transport system permease protein | SAMN04487831_102186 | Not Available | Positive | 834571 - 835530 | 36120.0 |
| putative aldouronate transport system permease protein | SAMN04487831_102187 | Not Available | Positive | 835543 - 836508 | 36111.1 |
| putative aldouronate transport system substrate-binding protein | SAMN04487831_102188 | Not Available | Positive | 836581 - 838254 | 61867.2 |
| uncharacterized membrane protein yesl | SAMN04487831_102189 | Not Available | Positive | 838367 - 839017 | 24839.0 |
| beta-glucosidase | SAMN04487831_102190 | Not Available | Positive | 838989 - 841130 | 78805.3 |
| lysophospholipase l1 | SAMN04487831_102191 | Not Available | Positive | 841143 - 842846 | 63554.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
