Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sortase a | SAMN04487831_102132 | Not Available | Positive | 780043 - 780669 | 23105.8 |
| hydrogenase nickel incorporation protein hypb | SAMN04487831_102133 | Not Available | Positive | 780922 - 781596 | 24771.6 |
| nadph-dependent glutamate synthase beta chain | SAMN04487831_102134 | Not Available | Positive | 781660 - 784449 | 103107.0 |
| acetyl esterase/lipase | SAMN04487831_102135 | Not Available | Positive | 784606 - 785604 | 37756.2 |
| helix-turn-helix domain-containing protein | SAMN04487831_102136 | Not Available | Positive | 785719 - 786474 | 27381.3 |
| cytidylate kinase | SAMN04487831_102137 | Not Available | Negative | 786881 - 787483 | 22919.4 |
| hypothetical protein | SAMN04487831_102138 | Not Available | Negative | 787517 - 788158 | 23997.5 |
| trk system potassium uptake protein trkh | SAMN04487831_102139 | Not Available | Negative | 788177 - 789685 | 55229.4 |
| trk system potassium uptake protein trka | SAMN04487831_102140 | Not Available | Negative | 789693 - 791081 | 50479.9 |
| hypothetical protein | SAMN04487831_102141 | Not Available | Negative | 791165 - 791665 | 18646.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
