Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gtp pyrophosphokinase | SAMN04487831_102122 | Not Available | Positive | 764268 - 766568 | 86916.0 |
| glyoxylase, beta-lactamase superfamily ii | SAMN04487831_102123 | Not Available | Positive | 766578 - 767198 | 22390.9 |
| oxygen-independent coproporphyrinogen-3 oxidase | SAMN04487831_102124 | Not Available | Positive | 767211 - 768650 | 54877.6 |
| histidyl-trna synthetase | SAMN04487831_102125 | Not Available | Positive | 768641 - 769900 | 46997.5 |
| flavin reductase like domain-containing protein | SAMN04487831_102126 | Not Available | Negative | 769935 - 770459 | 20057.2 |
| eal domain, c-di-gmp-specific phosphodiesterase class i (or its enzymatically inactive variant) | SAMN04487831_102127 | Not Available | Negative | 770477 - 772402 | 73291.0 |
| branched chain amino acid aminotransferase apoenzyme | SAMN04487831_102128 | Not Available | Positive | 772593 - 773657 | 39938.2 |
| diguanylate cyclase (ggdef) domain-containing protein | SAMN04487831_102129 | Not Available | Positive | 773636 - 776269 | 98549.3 |
| glycine hydroxymethyltransferase | SAMN04487831_102130 | Not Available | Positive | 776330 - 777595 | 45768.9 |
| collagen binding domain-containing protein | SAMN04487831_102131 | Not Available | Positive | 777762 - 780083 | 84116.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
