Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbohydrate binding module (family 6) | SAMN04487831_102112 | Not Available | Negative | 754417 - 755790 | 47903.9 |
| diguanylate cyclase (ggdef) domain-containing protein | SAMN04487831_102113 | Not Available | Negative | 756076 - 757824 | 65460.7 |
| hypothetical protein | SAMN04487831_102114 | Not Available | Positive | 758106 - 758279 | 6813.03 |
| helix-turn-helix | SAMN04487831_102115 | Not Available | Positive | 758263 - 758544 | 10559.9 |
| helix-turn-helix | SAMN04487831_102116 | Not Available | Negative | 758602 - 758805 | 7965.56 |
| ig-like domain (group 2) | SAMN04487831_102117 | Not Available | Positive | 759120 - 760982 | 62957.4 |
| hypothetical protein | SAMN04487831_102118 | Not Available | Positive | 761100 - 761291 | 7304.67 |
| protein of unknown function | SAMN04487831_102119 | Not Available | Negative | 761539 - 761976 | 16737.9 |
| protein of unknown function | SAMN04487831_102120 | Not Available | Negative | 761991 - 762242 | 9702.78 |
| atpase components of abc transporters with duplicated atpase domains | SAMN04487831_102121 | Not Available | Positive | 762467 - 764107 | 61903.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
