Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487831_102102 | Not Available | Positive | 736165 - 736965 | 29792.7 |
| mannose or cellobiose epimerase, n-acyl-d-glucosamine 2-epimerase family | SAMN04487831_102103 | Not Available | Positive | 736998 - 738230 | 46481.4 |
| adp-ribose pyrophosphatase yjhb, nudix family | SAMN04487831_102104 | Not Available | Positive | 738262 - 738732 | 17711.9 |
| Trna-glu | Not Available | Not Available | Positive | 738810 - 738884 | Not Available |
| glucose-1-phosphate adenylyltransferase | SAMN04487831_102106 | Not Available | Positive | 739171 - 740310 | 41503.6 |
| glucose-1-phosphate adenylyltransferase | SAMN04487831_102107 | Not Available | Positive | 740314 - 741432 | 42122.3 |
| beta-xylosidase, gh43 family | SAMN04487831_102108 | Not Available | Positive | 741659 - 748543 | 255298.0 |
| concanavalin a-like lectin/glucanases superfamily protein | SAMN04487831_102109 | Not Available | Positive | 748561 - 751254 | 95308.0 |
| pyruvate kinase | SAMN04487831_102110 | Not Available | Positive | 751412 - 752827 | 51151.7 |
| cellulose binding domain-containing protein | SAMN04487831_102111 | Not Available | Negative | 753081 - 754208 | 41354.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
