Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iron complex transport system permease protein | SAMN04487831_10161 | Not Available | Negative | 53272 - 54273 | 34915.9 |
| iron complex transport system substrate-binding protein | SAMN04487831_10162 | Not Available | Negative | 54260 - 55300 | 37596.1 |
| arac-like ligand binding domain-containing protein | SAMN04487831_10163 | Not Available | Negative | 55563 - 56618 | 41231.0 |
| ribose transport system atp-binding protein | SAMN04487831_10164 | Not Available | Positive | 56790 - 58298 | 55509.6 |
| ribose transport system permease protein | SAMN04487831_10165 | Not Available | Positive | 58309 - 59289 | 34689.6 |
| substrate-binding protein domain-containing protein | SAMN04487831_10166 | Not Available | Positive | 59346 - 60500 | 41367.8 |
| ribose transport system permease protein | SAMN04487831_10167 | Not Available | Positive | 60517 - 61497 | 34978.0 |
| alpha-l-rhamnosidase | SAMN04487831_10168 | Not Available | Positive | 61494 - 62969 | 56679.3 |
| beta-n-acetylhexosaminidase | SAMN04487831_10169 | Not Available | Positive | 62981 - 64738 | 65271.1 |
| beta-phosphoglucomutase | SAMN04487831_10170 | Not Available | Positive | 64740 - 65375 | 23469.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
