Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487831_10281 | Not Available | Positive | 715751 - 715978 | 8753.4 |
| transcriptional regulator, contains xre-family hth domain | SAMN04487831_10282 | Not Available | Positive | 716154 - 717029 | 32818.8 |
| predicted membrane protein | SAMN04487831_10283 | Not Available | Negative | 717081 - 717791 | 26854.3 |
| shikimate kinase | SAMN04487831_10284 | Not Available | Positive | 718071 - 718571 | 18231.2 |
| hypothetical protein | SAMN04487831_10285 | Not Available | Negative | 718568 - 719272 | 27044.4 |
| ig-like domain (group 2) | SAMN04487831_10286 | Not Available | Positive | 719460 - 720668 | 44590.9 |
| hypothetical protein | SAMN04487831_10287 | Not Available | Positive | 720805 - 721500 | 25494.1 |
| protein n-acetyltransferase, rimj/riml family | SAMN04487831_10288 | Not Available | Positive | 721500 - 722252 | 28824.2 |
| arac-type dna-binding protein | SAMN04487831_10289 | Not Available | Positive | 722253 - 723080 | 32123.1 |
| Trna-lys | Not Available | Not Available | Positive | 723174 - 723246 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
