Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lyzozyme m1 (1,4-beta-n-acetylmuramidase), gh25 family | SAMN04487831_10251 | Not Available | Positive | 689832 - 691466 | 59006.8 |
| aspartate carbamoyltransferase regulatory subunit | SAMN04487831_10252 | Not Available | Negative | 691509 - 691946 | 16439.1 |
| aspartate carbamoyltransferase | SAMN04487831_10253 | Not Available | Negative | 691960 - 692874 | 34450.6 |
| replication restart dna helicase pria | SAMN04487831_10254 | Not Available | Positive | 692970 - 695201 | 83643.9 |
| peptide deformylase | SAMN04487831_10255 | Not Available | Positive | 695227 - 695721 | 18254.8 |
| methionyl-trna formyltransferase | SAMN04487831_10256 | Not Available | Positive | 695725 - 696660 | 33879.0 |
| 16s rrna (cytosine967-c5)-methyltransferase | SAMN04487831_10257 | Not Available | Positive | 696647 - 697918 | 47981.6 |
| 23s rrna (adenine2503-c2)-methyltransferase | SAMN04487831_10258 | Not Available | Positive | 697897 - 698961 | 40447.5 |
| protein phosphatase | SAMN04487831_10259 | Not Available | Positive | 698961 - 699680 | 25868.7 |
| serine/threonine protein kinase | SAMN04487831_10260 | Not Available | Positive | 699703 - 701568 | 67354.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
