Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| f-type h+-transporting atpase subunit epsilon | SAMN04487831_10241 | Not Available | Positive | 681948 - 682373 | 15615.6 |
| lysophospholipase, alpha-beta hydrolase superfamily | SAMN04487831_10242 | Not Available | Positive | 682456 - 683400 | 35564.4 |
| hypothetical protein | SAMN04487831_10243 | Not Available | Positive | 683417 - 684460 | 40093.2 |
| methyltransferase domain-containing protein | SAMN04487831_10244 | Not Available | Positive | 684464 - 685207 | 28521.3 |
| molecular chaperone hsp33 | SAMN04487831_10245 | Not Available | Positive | 685207 - 686076 | 31388.8 |
| putative peptidoglycan binding domain-containing protein | SAMN04487831_10246 | Not Available | Positive | 686184 - 687899 | 63907.8 |
| histidinol-phosphate aminotransferase | SAMN04487831_10247 | Not Available | Positive | 687877 - 688938 | 39811.6 |
| uncharacterized membrane protein | SAMN04487831_10248 | Not Available | Positive | 688938 - 689429 | 17420.1 |
| hypothetical protein | SAMN04487831_10249 | Not Available | Positive | 689431 - 689607 | 6447.15 |
| hypothetical protein | SAMN04487831_10250 | Not Available | Positive | 689595 - 689786 | 7550.52 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
