Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transposase dde domain-containing protein | SAMN04487831_101592 | Not Available | Negative | 636581 - 636822 | 9452.64 |
| hypothetical protein | SAMN04487831_1022 | Not Available | Positive | 637265 - 638857 | 59635.1 |
| diaminopimelate dehydrogenase | SAMN04487831_1023 | Not Available | Positive | 638973 - 639950 | 35517.9 |
| n-acetylglucosamine 6-phosphate deacetylase | SAMN04487831_1024 | Not Available | Negative | 639980 - 641086 | 39693.3 |
| glucosamine-6-phosphate deaminase | SAMN04487831_1025 | Not Available | Negative | 641083 - 641847 | 27932.3 |
| pts system, n-acetylglucosamine-specific iic component | SAMN04487831_1026 | Not Available | Positive | 642013 - 643452 | 51427.5 |
| hypothetical protein | SAMN04487831_1027 | Not Available | Negative | 643493 - 643948 | 17109.7 |
| pyruvate formate lyase activating enzyme | SAMN04487831_1028 | Not Available | Negative | 644091 - 644825 | 27464.0 |
| formate c-acetyltransferase | SAMN04487831_1029 | Not Available | Negative | 645034 - 647292 | 84548.0 |
| diguanylate cyclase (ggdef) domain-containing protein | SAMN04487831_10210 | Not Available | Positive | 647814 - 649664 | 69294.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
