Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cysteinyl-trna synthetase | SAMN04487831_101582 | Not Available | Negative | 625712 - 627133 | 53484.1 |
| 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | SAMN04487831_101583 | Not Available | Negative | 627139 - 627690 | 19736.6 |
| protein of unknown function | SAMN04487831_101584 | Not Available | Negative | 627801 - 628832 | 38100.4 |
| phoh-like atpase | SAMN04487831_101585 | Not Available | Negative | 628977 - 630260 | 47487.7 |
| magnesium transporter | SAMN04487831_101586 | Not Available | Negative | 630480 - 631868 | 50778.6 |
| atp-dependent lon protease | SAMN04487831_101587 | Not Available | Negative | 632093 - 633574 | 54805.4 |
| uncharacterized membrane-anchored protein yitt, contains duf161 and duf2179 domains | SAMN04487831_101588 | Not Available | Negative | 633701 - 634552 | 30983.8 |
| hypothetical protein | SAMN04487831_101589 | Not Available | Negative | 634704 - 635171 | 17622.9 |
| hypothetical protein | SAMN04487831_101590 | Not Available | Negative | 635199 - 635927 | 28357.8 |
| hypothetical protein | SAMN04487831_101591 | Not Available | Negative | 635942 - 636355 | 15686.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
