Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| shikimate dehydrogenase | SAMN04487831_101572 | Not Available | Positive | 617250 - 618125 | 31767.3 |
| major facilitator superfamily protein | SAMN04487831_101573 | Not Available | Positive | 618164 - 619381 | 42785.7 |
| 3-dehydroquinate dehydratase | SAMN04487831_101574 | Not Available | Positive | 619407 - 620168 | 27242.8 |
| trap-type c4-dicarboxylate transport system, small permease component | SAMN04487831_101575 | Not Available | Positive | 620244 - 620873 | 24715.8 |
| c4-dicarboxylate transporter, dctm subunit | SAMN04487831_101576 | Not Available | Positive | 620870 - 622159 | 45365.9 |
| tripartite atp-independent transporter solute receptor, dctp family | SAMN04487831_101577 | Not Available | Positive | 622169 - 623176 | 37836.9 |
| acetyltransferase (gnat) family protein | SAMN04487831_101578 | Not Available | Positive | 623445 - 623918 | 18440.9 |
| rna polymerase sporulation-specific sigma factor | SAMN04487831_101579 | Not Available | Negative | 623929 - 624516 | 22426.7 |
| 23s rrna (guanosine2251-2'-o)-methyltransferase | SAMN04487831_101580 | Not Available | Negative | 624535 - 625284 | 26856.3 |
| ribonuclease-3 family protein | SAMN04487831_101581 | Not Available | Negative | 625287 - 625727 | 16557.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
