Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoglycerate mutase | SAMN04487831_101562 | Not Available | Negative | 604613 - 606157 | 56585.4 |
| poly-gamma-glutamate synthesis protein (capsule biosynthesis protein) | SAMN04487831_101563 | Not Available | Negative | 606202 - 607578 | 50444.4 |
| hypothetical protein | SAMN04487831_101564 | Not Available | Negative | 607565 - 608806 | 45692.8 |
| triosephosphate isomerase | SAMN04487831_101565 | Not Available | Negative | 608979 - 609725 | 26611.0 |
| phosphoglycerate kinase | SAMN04487831_101566 | Not Available | Negative | 609744 - 610967 | 43255.9 |
| glyceraldehyde 3-phosphate dehydrogenase | SAMN04487831_101567 | Not Available | Negative | 611051 - 612067 | 36404.3 |
| histidinol-phosphatase (php family) | SAMN04487831_101568 | Not Available | Positive | 612241 - 613047 | 30780.5 |
| shikimate kinase | SAMN04487831_101569 | Not Available | Negative | 613078 - 613869 | 30282.6 |
| 2,4-dienoyl-coa reductase | SAMN04487831_101570 | Not Available | Negative | 613982 - 615982 | 73998.8 |
| dna-binding transcriptional regulator, lysr family | SAMN04487831_101571 | Not Available | Negative | 616117 - 617001 | 33053.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
