Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellin | SAMN04487831_101552 | Not Available | Positive | 589815 - 591662 | 66382.2 |
| protein of unknown function | SAMN04487831_101553 | Not Available | Negative | 591677 - 593062 | 50847.8 |
| abc-2 type transport system permease protein | SAMN04487831_101554 | Not Available | Negative | 593073 - 594545 | 53831.1 |
| abc-2 type transport system permease protein | SAMN04487831_101555 | Not Available | Negative | 594545 - 595252 | 26523.4 |
| abc-2 type transport system atp-binding protein | SAMN04487831_101556 | Not Available | Negative | 595252 - 596268 | 37537.1 |
| hypothetical protein | SAMN04487831_101557 | Not Available | Negative | 596405 - 599965 | 128819.0 |
| sodium:dicarboxylate symporter family protein | SAMN04487831_101558 | Not Available | Negative | 600081 - 600728 | 22302.7 |
| adenylosuccinate lyase | SAMN04487831_101559 | Not Available | Negative | 600753 - 602207 | 54377.5 |
| amidophosphoribosyltransferase | SAMN04487831_101560 | Not Available | Negative | 602200 - 603645 | 53025.0 |
| phosphoribosylaminoimidazole-succinocarboxamide synthase | SAMN04487831_101561 | Not Available | Negative | 603679 - 604545 | 32494.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
