Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cellulose binding domain-containing protein | SAMN04487831_101512 | Not Available | Negative | 536187 - 538628 | 87961.4 |
| cellulose binding domain-containing protein | SAMN04487831_101513 | Not Available | Negative | 538778 - 540430 | 60867.3 |
| sh3 domain-containing protein | SAMN04487831_101514 | Not Available | Negative | 540783 - 542396 | 58799.1 |
| anthranilate synthase component 2 | SAMN04487831_101515 | Not Available | Negative | 542498 - 543061 | 20698.1 |
| anthranilate synthase component 1 | SAMN04487831_101516 | Not Available | Negative | 543058 - 544551 | 55454.5 |
| tryptophan synthase, alpha chain | SAMN04487831_101517 | Not Available | Negative | 544541 - 545317 | 28100.6 |
| phosphoribosylanthranilate isomerase | SAMN04487831_101518 | Not Available | Negative | 545310 - 547100 | 65970.6 |
| indole-3-glycerol phosphate synthase | SAMN04487831_101519 | Not Available | Negative | 547102 - 547881 | 28802.7 |
| anthranilate phosphoribosyltransferase | SAMN04487831_101520 | Not Available | Negative | 547841 - 548914 | 38115.9 |
| hypothetical protein | SAMN04487831_101521 | Not Available | Positive | 549576 - 549743 | 5943.52 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
