Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487831_101491 | Not Available | Negative | 502591 - 503151 | 20079.1 |
| cobalamin biosynthesis protein cbik, co2+ chelatase | SAMN04487831_101492 | Not Available | Negative | 503164 - 504363 | 43013.0 |
| diguanylate cyclase (ggdef) domain-containing protein | SAMN04487831_101494 | Not Available | Negative | 504712 - 506868 | 82081.7 |
| small gtp-binding protein domain-containing protein | SAMN04487831_101495 | Not Available | Negative | 507008 - 509551 | 95015.9 |
| uncharacterized membrane-anchored protein yitt, contains duf161 and duf2179 domains | SAMN04487831_101496 | Not Available | Negative | 509551 - 510417 | 31719.6 |
| 16s rrna c967 or c1407 c5-methylase, rsmb/rsmf family | SAMN04487831_101497 | Not Available | Negative | 510446 - 511768 | 49588.9 |
| arginyl-trna synthetase | SAMN04487831_101498 | Not Available | Negative | 511769 - 513529 | 65476.5 |
| hypothetical protein | SAMN04487831_101499 | Not Available | Negative | 513648 - 514016 | 14026.0 |
| predicted thioesterase | SAMN04487831_101500 | Not Available | Positive | 514121 - 514504 | 13773.8 |
| cohesin domain-containing protein | SAMN04487831_101501 | Not Available | Negative | 514547 - 515350 | 28762.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
