Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ssra-binding protein | SAMN04487831_10141 | Not Available | Positive | 40138 - 40605 | 18237.4 |
| septum formation protein | SAMN04487831_10142 | Not Available | Positive | 40605 - 41156 | 19864.8 |
| Tmrna,resume consensus sequence (at 81): attaaacgctaacgataa | Not Available | Not Available | Positive | 41260 - 41599 | Not Available |
| d-alanyl-d-alanine carboxypeptidase (penicillin-binding protein 5/6) | SAMN04487831_10144 | Not Available | Positive | 41744 - 42886 | 41807.4 |
| phosphoglycolate phosphatase | SAMN04487831_10145 | Not Available | Negative | 42879 - 43526 | 24303.1 |
| phosphinothricin acetyltransferase | SAMN04487831_10146 | Not Available | Positive | 43696 - 44223 | 19827.6 |
| glycosyl hydrolases family 25 | SAMN04487831_10147 | Not Available | Positive | 44225 - 45232 | 37683.5 |
| hypothetical protein | SAMN04487831_10148 | Not Available | Positive | 45250 - 45687 | 16194.7 |
| predicted hydrolase, hd superfamily | SAMN04487831_10149 | Not Available | Positive | 46175 - 46768 | 22060.4 |
| hypothetical protein | SAMN04487831_10150 | Not Available | Positive | 46775 - 46996 | 8443.96 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
