Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diguanylate cyclase (ggdef) domain-containing protein | SAMN04487831_101431 | Not Available | Negative | 434565 - 436220 | 63286.8 |
| dna ligase (nad+) | SAMN04487831_101432 | Not Available | Negative | 436324 - 438327 | 73964.0 |
| 23s rrna pseudouridine2604 synthase | SAMN04487831_101433 | Not Available | Negative | 438327 - 439049 | 27117.2 |
| sh3 domain-containing protein | SAMN04487831_101434 | Not Available | Negative | 439127 - 440404 | 47465.9 |
| Trna-arg | Not Available | Not Available | Positive | 440438 - 440511 | Not Available |
| shikimate dehydrogenase | SAMN04487831_101436 | Not Available | Positive | 440652 - 441512 | 31280.7 |
| 3-deoxy-d-arabinoheptulosonate-7-phosphate synthase | SAMN04487831_101437 | Not Available | Positive | 441515 - 442546 | 38695.1 |
| purine-binding chemotaxis protein chew | SAMN04487831_101438 | Not Available | Negative | 442654 - 443106 | 16997.7 |
| methyl-accepting chemotaxis protein | SAMN04487831_101439 | Not Available | Negative | 443147 - 445168 | 71779.6 |
| adp-ribose pyrophosphatase | SAMN04487831_101440 | Not Available | Negative | 445457 - 445999 | 20496.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
