Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellin | SAMN04487831_101411 | Not Available | Negative | 416752 - 418155 | 49381.5 |
| alanine racemase | SAMN04487831_101412 | Not Available | Negative | 418348 - 419517 | 43072.2 |
| polar amino acid transport system atp-binding protein | SAMN04487831_101413 | Not Available | Negative | 419612 - 420349 | 26982.6 |
| polar amino acid transport system substrate-binding protein | SAMN04487831_101414 | Not Available | Negative | 420367 - 421872 | 54503.7 |
| hypothetical protein | SAMN04487831_101415 | Not Available | Negative | 422000 - 422743 | 29104.3 |
| protein-tyrosine phosphatase | SAMN04487831_101416 | Not Available | Negative | 422748 - 423239 | 19091.6 |
| l,d-transpeptidase catalytic domain | SAMN04487831_101417 | Not Available | Negative | 423312 - 424004 | 25671.6 |
| enterochelin esterase | SAMN04487831_101418 | Not Available | Negative | 424189 - 426033 | 66655.3 |
| Trna-met | Not Available | Not Available | Positive | 426229 - 426302 | Not Available |
| Trna-val | Not Available | Not Available | Positive | 426328 - 426400 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
