Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pseudouridine kinase | SAMN04487831_101401 | Not Available | Negative | 406032 - 406958 | 33517.9 |
| gtpase, g3e family | SAMN04487831_101402 | Not Available | Positive | 407058 - 407993 | 35273.1 |
| alpha-amylase | SAMN04487831_101403 | Not Available | Negative | 408061 - 409845 | 64467.4 |
| hypothetical protein | SAMN04487831_101404 | Not Available | Negative | 410136 - 410312 | 6676.88 |
| 3-isopropylmalate/(r)-2-methylmalate dehydratase large subunit | SAMN04487831_101405 | Not Available | Negative | 410424 - 411665 | 44403.6 |
| 3-isopropylmalate/(r)-2-methylmalate dehydratase small subunit | SAMN04487831_101406 | Not Available | Negative | 411679 - 412158 | 17412.0 |
| 3-isopropylmalate/(r)-2-methylmalate dehydratase large subunit | SAMN04487831_101407 | Not Available | Negative | 412158 - 413405 | 44699.8 |
| 3-isopropylmalate/(r)-2-methylmalate dehydratase small subunit | SAMN04487831_101408 | Not Available | Negative | 413421 - 413888 | 17027.5 |
| hypothetical protein | SAMN04487831_101409 | Not Available | Negative | 413968 - 415911 | 72841.5 |
| inner membrane protein | SAMN04487831_101410 | Not Available | Positive | 416107 - 416655 | 20502.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
