Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| biotin-lipoyl like | SAMN04487831_101391 | Not Available | Negative | 396864 - 398357 | 54988.1 |
| putative abc transport system atp-binding protein | SAMN04487831_101392 | Not Available | Negative | 398341 - 399045 | 25750.8 |
| hlyd family secretion protein | SAMN04487831_101393 | Not Available | Negative | 399048 - 400244 | 43919.8 |
| uncharacterized protein | SAMN04487831_101394 | Not Available | Negative | 400376 - 400834 | 17680.1 |
| hypothetical protein | SAMN04487831_101395 | Not Available | Negative | 400950 - 401831 | 33414.2 |
| pilz domain-containing protein | SAMN04487831_101396 | Not Available | Negative | 401843 - 402505 | 23942.8 |
| methylenetetrahydrofolate dehydrogenase (nadp+) / methenyltetrahydrofolate cyclohydrolase | SAMN04487831_101397 | Not Available | Negative | 402537 - 403391 | 30733.5 |
| formiminotetrahydrofolate cyclodeaminase | SAMN04487831_101398 | Not Available | Negative | 403405 - 404019 | 21924.4 |
| hypothetical protein | SAMN04487831_101399 | Not Available | Negative | 404095 - 404268 | 6935.01 |
| diguanylate cyclase (ggdef) domain-containing protein | SAMN04487831_101400 | Not Available | Negative | 404331 - 406007 | 63657.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
