Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted o-methyltransferase yrrm | SAMN04487831_10131 | Not Available | Positive | 30229 - 30876 | 24320.4 |
| putative protease | SAMN04487831_10132 | Not Available | Positive | 30873 - 32102 | 46419.9 |
| 6-phosphogluconolactonase | SAMN04487831_10133 | Not Available | Positive | 32123 - 33175 | 39269.7 |
| chorismate synthase | SAMN04487831_10134 | Not Available | Positive | 33248 - 34342 | 38845.1 |
| queuine trna-ribosyltransferase | SAMN04487831_10135 | Not Available | Positive | 34339 - 35475 | 42866.7 |
| preprotein translocase subunit yajc | SAMN04487831_10136 | Not Available | Positive | 35584 - 35883 | 11039.6 |
| uncharacterized membrane protein | SAMN04487831_10137 | Not Available | Negative | 35933 - 36796 | 32817.4 |
| hypothetical protein | SAMN04487831_10138 | Not Available | Positive | 36937 - 37458 | 18541.4 |
| preprotein translocase subunit secg | SAMN04487831_10139 | Not Available | Positive | 37569 - 37811 | 8835.17 |
| rnase r | SAMN04487831_10140 | Not Available | Positive | 37880 - 40135 | 84993.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
