Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosomal protein s18 acetylase rimi | SAMN04487831_101381 | Not Available | Negative | 388405 - 388908 | 19087.8 |
| n-acetyl-gamma-glutamyl-phosphate reductase | SAMN04487831_101382 | Not Available | Negative | 389061 - 390113 | 38872.7 |
| argininosuccinate synthase | SAMN04487831_101383 | Not Available | Positive | 390409 - 391632 | 45218.1 |
| hypothetical protein | SAMN04487831_101384 | Not Available | Negative | 391670 - 391837 | 6377.36 |
| hypothetical protein | SAMN04487831_101385 | Not Available | Negative | 391914 - 392396 | 18562.0 |
| protein of unknown function | SAMN04487831_101386 | Not Available | Negative | 392409 - 393992 | 59488.9 |
| putative transcriptional regulator | SAMN04487831_101387 | Not Available | Negative | 394004 - 394231 | 8262.17 |
| protein of unknown function | SAMN04487831_101388 | Not Available | Negative | 394254 - 394730 | 17931.7 |
| exodeoxyribonuclease-3 | SAMN04487831_101389 | Not Available | Negative | 394859 - 395611 | 29593.8 |
| putative abc transport system permease protein | SAMN04487831_101390 | Not Available | Negative | 395611 - 396864 | 45553.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
