Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase iii, delta subunit | SAMN04487831_101361 | Not Available | Negative | 368239 - 369219 | 37493.7 |
| cytidylate kinase | SAMN04487831_101362 | Not Available | Negative | 369263 - 369850 | 22332.9 |
| polar amino acid transport system atp-binding protein | SAMN04487831_101363 | Not Available | Negative | 369869 - 370612 | 27270.5 |
| polar amino acid transport system permease protein | SAMN04487831_101364 | Not Available | Negative | 370602 - 371336 | 26899.5 |
| polar amino acid transport system substrate-binding protein | SAMN04487831_101365 | Not Available | Negative | 371340 - 372134 | 27864.4 |
| hypothetical protein | SAMN04487831_101366 | Not Available | Negative | 372160 - 373137 | 36281.7 |
| putative pyruvate formate lyase activating enzyme | SAMN04487831_101367 | Not Available | Negative | 373153 - 374043 | 33314.8 |
| threonyl-trna synthetase | SAMN04487831_101368 | Not Available | Negative | 374046 - 375812 | 67715.6 |
| hypothetical protein | SAMN04487831_101369 | Not Available | Negative | 376157 - 377218 | 39991.3 |
| 8-oxo-dgtp diphosphatase | SAMN04487831_101370 | Not Available | Negative | 377222 - 377680 | 17582.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
