Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| molecular chaperone dnaj | SAMN04487831_101351 | Not Available | Negative | 356940 - 358109 | 41855.4 |
| molecular chaperone dnak | SAMN04487831_101352 | Not Available | Negative | 358113 - 360005 | 66763.7 |
| molecular chaperone grpe | SAMN04487831_101353 | Not Available | Negative | 360032 - 360637 | 22922.9 |
| heat-inducible transcription repressor hrca | SAMN04487831_101354 | Not Available | Negative | 360649 - 361698 | 38859.3 |
| gtp-binding protein lepa | SAMN04487831_101355 | Not Available | Positive | 361898 - 363703 | 67370.3 |
| oxygen-independent coproporphyrinogen-3 oxidase | SAMN04487831_101356 | Not Available | Positive | 363705 - 364907 | 45620.7 |
| ssu ribosomal protein s20p | SAMN04487831_101357 | Not Available | Positive | 365038 - 365301 | 9583.76 |
| pp_00355 | SAMN04487831_101358 | Not Available | Positive | 365369 - 366316 | Not Available |
| hypothetical protein | SAMN04487831_101359 | Not Available | Negative | 366325 - 367161 | 31470.3 |
| hypothetical protein | SAMN04487831_101360 | Not Available | Negative | 367154 - 367951 | 29786.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
