Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tryptophanyl-trna synthetase | SAMN04487831_101341 | Not Available | Negative | 345252 - 346259 | 38147.6 |
| hypothetical protein | SAMN04487831_101342 | Not Available | Negative | 346277 - 346819 | 20970.2 |
| glycogen operon protein | SAMN04487831_101343 | Not Available | Negative | 346835 - 348688 | 70097.6 |
| protein of unknown function | SAMN04487831_101344 | Not Available | Positive | 348819 - 349127 | 11684.0 |
| dna helicase-2 / atp-dependent dna helicase pcra | SAMN04487831_101345 | Not Available | Negative | 349130 - 350827 | 65600.2 |
| glutamyl-trna synthetase | SAMN04487831_101346 | Not Available | Negative | 350884 - 352332 | 54973.2 |
| protein of unknown function | SAMN04487831_101347 | Not Available | Negative | 352433 - 353725 | 44077.2 |
| protein of unknown function | SAMN04487831_101348 | Not Available | Negative | 353727 - 354416 | 25446.0 |
| vtc domain-containing protein | SAMN04487831_101349 | Not Available | Negative | 354438 - 355133 | 27939.4 |
| utp-hexose-1-phosphate uridylyltransferase | SAMN04487831_101350 | Not Available | Negative | 355282 - 356775 | 56795.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
