Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487831_101301 | Not Available | Negative | 306529 - 306855 | 12432.5 |
| rna polymerase sigma factor for flagellar operon flia | SAMN04487831_101302 | Not Available | Negative | 306919 - 307686 | 29359.2 |
| hypothetical protein | SAMN04487831_101303 | Not Available | Negative | 307719 - 308027 | 11343.8 |
| chemotaxis protein ched | SAMN04487831_101304 | Not Available | Negative | 308048 - 308533 | 17163.1 |
| chemotaxis protein chec | SAMN04487831_101305 | Not Available | Negative | 308547 - 309161 | 21792.6 |
| purine-binding chemotaxis protein chew | SAMN04487831_101306 | Not Available | Negative | 309173 - 309640 | 17201.7 |
| two-component system, chemotaxis family, sensor kinase chea | SAMN04487831_101307 | Not Available | Negative | 309655 - 311784 | 76636.4 |
| two-component system, chemotaxis family, response regulator cheb | SAMN04487831_101308 | Not Available | Negative | 311805 - 313055 | 44856.0 |
| c-di-gmp-binding flagellar brake protein ycgr, contains pilznr and pilz domains | SAMN04487831_101309 | Not Available | Negative | 313059 - 313802 | 28577.4 |
| flagellar biosynthesis protein flhg | SAMN04487831_101310 | Not Available | Negative | 313805 - 314680 | 31586.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
