Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methionine adenosyltransferase | SAMN04487831_1261 | Not Available | Positive | 3353634 - 3354267 | 23262.9 |
| abc-2 type transport system permease protein | SAMN04487831_1262 | Not Available | Positive | 3354283 - 3355023 | 27977.5 |
| abc-2 type transport system permease protein | SAMN04487831_1263 | Not Available | Positive | 3355040 - 3356002 | 36406.2 |
| acyl-coa synthetase (amp-forming)/amp-acid ligase ii | SAMN04487831_1264 | Not Available | Positive | 3356023 - 3357660 | 61613.7 |
| putative abc transport system atp-binding protein | SAMN04487831_1265 | Not Available | Positive | 3357657 - 3358373 | 26183.9 |
| ftsx-like permease family protein | SAMN04487831_1266 | Not Available | Positive | 3358366 - 3360093 | 66068.6 |
| surfactin synthase thioesterase subunit | SAMN04487831_1267 | Not Available | Positive | 3360116 - 3360817 | 27109.7 |
| 4'-phosphopantetheinyl transferase | SAMN04487831_1268 | Not Available | Negative | 3360822 - 3361445 | 23845.8 |
| plasmid replication protein | SAMN04487831_1271 | Not Available | Positive | 3361700 - 3362290 | 22719.7 |
| hypothetical protein | SAMN04487831_1272 | Not Available | Positive | 3362292 - 3362483 | 7222.63 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
