Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487831_1257 | Not Available | Positive | 3347568 - 3347966 | 15546.9 |
| acetyltransferase (gnat) domain-containing protein | SAMN04487831_1258 | Not Available | Positive | 3348020 - 3348463 | 17548.9 |
| protein involved in initiation of plasmid replication | SAMN04487831_1259 | Not Available | Positive | 3349095 - 3350375 | 50422.8 |
| hypothetical protein | SAMN04487831_12510 | Not Available | Positive | 3350437 - 3350622 | 7194.53 |
| hypothetical protein | SAMN04487831_12511 | Not Available | Positive | 3350623 - 3350982 | 14465.2 |
| chromosome partitioning protein | SAMN04487831_12512 | Not Available | Positive | 3351058 - 3351825 | 27772.6 |
| hypothetical protein | SAMN04487831_12513 | Not Available | Positive | 3351879 - 3352193 | 11998.2 |
| hypothetical protein | SAMN04487831_12514 | Not Available | Positive | 3352252 - 3352617 | 14106.1 |
| hypothetical protein | SAMN04487831_12515 | Not Available | Positive | 3352620 - 3352748 | 4867.38 |
| kila-n domain-containing protein | SAMN04487831_12516 | Not Available | Positive | 3352738 - 3353592 | 32607.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
