Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| voltage-gated potassium channel | SAMN04487831_1249 | Not Available | Negative | 3335221 - 3336192 | 36447.1 |
| n-acetylmuramoyl-l-alanine amidase | SAMN04487831_12410 | Not Available | Negative | 3336220 - 3337023 | 29080.4 |
| diguanylate cyclase (ggdef) domain-containing protein | SAMN04487831_12411 | Not Available | Positive | 3337207 - 3338673 | 55211.6 |
| uncharacterised protein family (upf0236) | SAMN04487831_12412 | Not Available | Positive | 3338775 - 3340280 | 58500.3 |
| protein of unknown function duf86 | SAMN04487831_1251 | Not Available | Positive | 3340627 - 3340826 | 7816.65 |
| putative efflux protein, mate family | SAMN04487831_1252 | Not Available | Positive | 3340970 - 3342292 | 48207.4 |
| laci family transcriptional regulator | SAMN04487831_1253 | Not Available | Positive | 3342301 - 3343305 | 38077.6 |
| site-specific dna recombinase | SAMN04487831_1254 | Not Available | Negative | 3343800 - 3344372 | 21036.5 |
| hypothetical protein | SAMN04487831_1255 | Not Available | Negative | 3344476 - 3345240 | 29401.6 |
| hypothetical protein | SAMN04487831_1256 | Not Available | Negative | 3345242 - 3346285 | 40344.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
