Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter | SAMN04487831_12315 | Not Available | Positive | 3323109 - 3324755 | 61283.0 |
| hypothetical protein | SAMN04487831_12316 | Not Available | Negative | 3324970 - 3325134 | 6361.09 |
| transposase dde domain-containing protein | SAMN04487831_1241 | Not Available | Negative | 3325284 - 3326600 | 50733.1 |
| beta-galactosidase | SAMN04487831_1242 | Not Available | Negative | 3326815 - 3328857 | 78414.2 |
| 3'-5' exoribonuclease | SAMN04487831_1243 | Not Available | Positive | 3329045 - 3329995 | 35635.2 |
| 23s rrna (uracil1939-c5)-methyltransferase | SAMN04487831_1244 | Not Available | Positive | 3329995 - 3331464 | 54594.7 |
| dna-binding transcriptional regulator, xre-family hth domain | SAMN04487831_1245 | Not Available | Negative | 3331471 - 3331827 | 13287.7 |
| dna-damage-inducible protein d | SAMN04487831_1246 | Not Available | Positive | 3332074 - 3332916 | 32541.7 |
| hypothetical protein | SAMN04487831_1247 | Not Available | Positive | 3333025 - 3333543 | 20093.8 |
| diguanylate cyclase (ggdef) domain-containing protein | SAMN04487831_1248 | Not Available | Positive | 3333751 - 3335235 | 56883.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
