Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| major facilitator superfamily protein | SAMN04487831_12215 | Not Available | Negative | 3301418 - 3302575 | 42643.4 |
| radical sam superfamily enzyme ygiq, upf0313 family | SAMN04487831_12216 | Not Available | Negative | 3302577 - 3304037 | 55853.6 |
| hypothetical protein | SAMN04487831_12217 | Not Available | Negative | 3304006 - 3304326 | 12528.8 |
| radical sam additional 4fe4s-binding spasm domain-containing protein | SAMN04487831_12218 | Not Available | Negative | 3304323 - 3305396 | 40944.6 |
| hypothetical protein | SAMN04487831_12219 | Not Available | Negative | 3305454 - 3305606 | 5856.04 |
| transposase dde domain-containing protein | SAMN04487831_12220 | Not Available | Negative | 3305902 - 3306486 | 22858.6 |
| pyrroline-5-carboxylate reductase | SAMN04487831_1231 | Not Available | Positive | 3306832 - 3307626 | 27983.6 |
| na+/h+ antiporter nhad | SAMN04487831_1232 | Not Available | Positive | 3307678 - 3308793 | 40969.9 |
| endoglucanase | SAMN04487831_1233 | Not Available | Positive | 3309020 - 3310549 | 55261.6 |
| 6-pyruvoyltetrahydropterin/6- carboxytetrahydropterin synthase | SAMN04487831_1234 | Not Available | Positive | 3310864 - 3311286 | 16025.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
