Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ubiquinone/menaquinone biosynthesis c-methylase ubie | SAMN04487831_1214 | Not Available | Negative | 3266016 - 3266807 | 29866.1 |
| amino acid adenylation domain-containing protein/thioester reductase domain-containing protein | SAMN04487831_1215 | Not Available | Negative | 3266836 - 3271035 | 160751.0 |
| ketoacyl-synthetase c-terminal extension | SAMN04487831_1216 | Not Available | Negative | 3271051 - 3273075 | 74893.2 |
| amino acid adenylation domain-containing protein | SAMN04487831_1217 | Not Available | Negative | 3273076 - 3282588 | 357558.0 |
| ghkl domain-containing protein | SAMN04487831_1218 | Not Available | Negative | 3282854 - 3284158 | 50876.4 |
| two component transcriptional regulator, lyttr family | SAMN04487831_1219 | Not Available | Negative | 3284155 - 3284880 | 28618.7 |
| transposase | SAMN04487831_1221 | Not Available | Positive | 3285456 - 3287021 | 60633.9 |
| dna replication protein dnac | SAMN04487831_1222 | Not Available | Positive | 3287036 - 3287827 | 29780.6 |
| hypothetical protein | SAMN04487831_1223 | Not Available | Positive | 3288841 - 3289440 | 22453.5 |
| yarhg domain-containing protein | SAMN04487831_1224 | Not Available | Positive | 3289952 - 3290836 | 33063.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
