Pseudobutyrivibrio sp. UC1225

Gram-positive

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Lachnospirales

Family

Lachnospiraceae

Genus

Pseudobutyrivibrio

Description

Pseudobutyrivibrio sp. UC1225 is a Gram-positive bacterium that inhabits the rumen of Bos species, commonly known as cattle. This organism possesses flagella, which facilitates its motility within the complex microbial environment of the rumen. Pseudobutyrivibrio sp. UC1225 has been characterized by having a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability and efficiency in the rumen ecosystem. The presence of Pseudobutyrivibrio sp. UC1225 in the rumen is significant, as this habitat is crucial for the digestion of fibrous plant materials in ruminants. Rumen bacteria, including Pseudobutyrivibrio species, play an essential role in breaking down complex carbohydrates, thereby aiding in nutrient absorption and overall digestive health of the host. The unique traits of Pseudobutyrivibrio sp. UC1225, such as its motility and singular replicon, may enhance its competitive advantage and functional contributions within the diverse microbial community of the rumen. Understanding the role of Pseudobutyrivibrio sp. UC1225 in the rumen microbiome can provide insights into microbial interactions and their impact on host nutrition and health. The specific accession number for this strain is FOVQ00000000.1, which serves as a reference for further studies on its genomic and functional characteristics. This knowledge can inform future research on improving livestock digestion and productivity through microbial management strategies.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderLachnospirales
FamilyLachnospiraceae
GenusPseudobutyrivibrio
SpeciesPseudobutyrivibrio sp. UC1225
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatrumen
Biotic relationshipNot Available
Host(s)Bos
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudobutyrivibrio sp. UC1225 genome assembly, contig:

Gene Summary

Adenine Count

1032307 bp

Thymine Count

1029883 bp

Guanine Count

649089 bp

Cytosine Count

660589 bp

Genome Length

3371868 bp

Protein-coding Genes

3042 genes

Non-Coding Genes

45 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ubiquinone/menaquinone biosynthesis c-methylase ubieSAMN04487831_1214Not AvailableNegative3266016 - 326680729866.1
amino acid adenylation domain-containing protein/thioester reductase domain-containing proteinSAMN04487831_1215Not AvailableNegative3266836 - 3271035160751.0
ketoacyl-synthetase c-terminal extensionSAMN04487831_1216Not AvailableNegative3271051 - 327307574893.2
amino acid adenylation domain-containing proteinSAMN04487831_1217Not AvailableNegative3273076 - 3282588357558.0
ghkl domain-containing proteinSAMN04487831_1218Not AvailableNegative3282854 - 328415850876.4
two component transcriptional regulator, lyttr familySAMN04487831_1219Not AvailableNegative3284155 - 328488028618.7
transposaseSAMN04487831_1221Not AvailablePositive3285456 - 328702160633.9
dna replication protein dnacSAMN04487831_1222Not AvailablePositive3287036 - 328782729780.6
hypothetical proteinSAMN04487831_1223Not AvailablePositive3288841 - 328944022453.5
yarhg domain-containing proteinSAMN04487831_1224Not AvailablePositive3289952 - 329083633063.7

Displaying genes 3001 – 3010 of 3087 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.