Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487831_12019 | Not Available | Positive | 3254457 - 3255836 | 53673.3 |
| hypothetical protein | SAMN04487831_12020 | Not Available | Positive | 3255862 - 3256641 | 30167.7 |
| uncharacterised protein family (upf0158) | SAMN04487831_12021 | Not Available | Positive | 3256682 - 3257089 | 16303.8 |
| hypothetical protein | SAMN04487831_12022 | Not Available | Negative | 3257020 - 3257502 | 17103.0 |
| putative hydrolase of the had superfamily | SAMN04487831_12023 | Not Available | Negative | 3257586 - 3258185 | 23263.1 |
| carbohydrate binding domain-containing protein | SAMN04487831_12024 | Not Available | Positive | 3258367 - 3261594 | 119235.0 |
| hypothetical protein | SAMN04487831_12025 | Not Available | Positive | 3261795 - 3263156 | 49578.6 |
| methionine adenosyltransferase | SAMN04487831_1211 | Not Available | Negative | 3263297 - 3263846 | 19566.2 |
| abc-2 type transport system atp-binding protein | SAMN04487831_1212 | Not Available | Negative | 3263863 - 3264810 | 35619.0 |
| transmembrane secretion effector | SAMN04487831_1213 | Not Available | Negative | 3264842 - 3266008 | 43433.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
