Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphatidate cytidylyltransferase | SAMN04487831_101291 | Not Available | Negative | 298657 - 299457 | 29483.4 |
| undecaprenyl diphosphate synthase | SAMN04487831_101292 | Not Available | Negative | 299470 - 300168 | 26645.8 |
| ribosome recycling factor | SAMN04487831_101293 | Not Available | Negative | 300245 - 300799 | 21016.2 |
| uridylate kinase | SAMN04487831_101294 | Not Available | Negative | 300809 - 301504 | 25408.8 |
| protein ccma, bactofilin family | SAMN04487831_101295 | Not Available | Negative | 301544 - 302326 | 26873.4 |
| peptidoglycan/xylan/chitin deacetylase, pgda/cda1 family | SAMN04487831_101296 | Not Available | Negative | 302352 - 303266 | 34086.4 |
| elongation factor ts | SAMN04487831_101297 | Not Available | Negative | 303391 - 304320 | 33550.1 |
| small subunit ribosomal protein s2 | SAMN04487831_101298 | Not Available | Negative | 304325 - 305053 | 27050.7 |
| hypothetical protein | SAMN04487831_101299 | Not Available | Negative | 305199 - 305774 | 21103.7 |
| hypothetical protein | SAMN04487831_101300 | Not Available | Negative | 305774 - 306514 | 28088.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
