Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosomal protein l11 methyltransferase | SAMN04487831_10121 | Not Available | Positive | 21679 - 22638 | 35436.8 |
| 16s rrna (uracil1498-n3)-methyltransferase | SAMN04487831_10122 | Not Available | Positive | 22651 - 23382 | 27109.0 |
| cysteine desulfurase | SAMN04487831_10123 | Not Available | Positive | 23385 - 24542 | 42096.0 |
| thiamine biosynthesis protein thii | SAMN04487831_10124 | Not Available | Positive | 24565 - 25746 | 44170.4 |
| pts hpr component phosphorylation site | SAMN04487831_10125 | Not Available | Negative | 25809 - 26039 | 8479.14 |
| threonylcarbamoyladenosine trna methylthiotransferase mtab | SAMN04487831_10126 | Not Available | Positive | 26159 - 27484 | 49530.0 |
| uncharacterized protein, upf0297 family | SAMN04487831_10127 | Not Available | Positive | 27553 - 27819 | 10059.9 |
| putative holliday junction resolvase | SAMN04487831_10128 | Not Available | Positive | 27819 - 28244 | 16211.5 |
| protein of unknown function | SAMN04487831_10129 | Not Available | Positive | 28247 - 28510 | 9902.3 |
| ribonuclease j | SAMN04487831_10130 | Not Available | Positive | 28551 - 30227 | 61623.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
