Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipase (class 3) | SAMN04487831_11941 | Not Available | Positive | 3237466 - 3238677 | 43716.9 |
| transposase dde domain-containing protein | SAMN04487831_11942 | Not Available | Negative | 3238832 - 3239122 | 11385.0 |
| hypothetical protein | SAMN04487831_1201 | Not Available | Positive | 3239618 - 3240949 | 50990.1 |
| hypothetical protein | SAMN04487831_1202 | Not Available | Positive | 3241042 - 3241257 | 8069.64 |
| site-specific recombinase xerd | SAMN04487831_1203 | Not Available | Negative | 3241385 - 3242674 | 49410.7 |
| helix-turn-helix | SAMN04487831_1204 | Not Available | Negative | 3242749 - 3243369 | 23950.4 |
| dna binding domain-containing protein, excisionase family | SAMN04487831_1205 | Not Available | Positive | 3243623 - 3243844 | 8463.3 |
| hypothetical protein | SAMN04487831_1206 | Not Available | Positive | 3243864 - 3244169 | 11559.3 |
| plasmid recombination enzyme | SAMN04487831_1207 | Not Available | Positive | 3244358 - 3245623 | 48461.5 |
| predicted nuclease of restriction endonuclease-like (recb) superfamily, duf1016 family | SAMN04487831_1208 | Not Available | Positive | 3245750 - 3246739 | 38658.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
