Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| a predicted alpha-helical domain with a conserved er motif. | SAMN04487831_11921 | Not Available | Positive | 3214988 - 3215662 | 26343.3 |
| transglutaminase-like enzyme, putative cysteine protease | SAMN04487831_11922 | Not Available | Positive | 3215659 - 3216471 | 30574.2 |
| hypothetical protein | SAMN04487831_11923 | Not Available | Positive | 3216446 - 3217423 | 36195.8 |
| hypothetical protein | SAMN04487831_11924 | Not Available | Positive | 3217420 - 3218349 | 34764.8 |
| hypothetical protein | SAMN04487831_11925 | Not Available | Positive | 3218380 - 3219369 | 39025.3 |
| fusaric acid resistance protein-like | SAMN04487831_11926 | Not Available | Positive | 3219375 - 3219881 | 19070.0 |
| transmembrane secretion effector | SAMN04487831_11927 | Not Available | Positive | 3219981 - 3221264 | 45818.1 |
| dna-binding transcriptional regulator, arsr family | SAMN04487831_11928 | Not Available | Positive | 3221261 - 3222400 | 43565.3 |
| pyruvate phosphate dikinase, pep/pyruvate binding domain | SAMN04487831_11929 | Not Available | Positive | 3222411 - 3224987 | 99578.8 |
| polar amino acid transport system substrate-binding protein | SAMN04487831_11930 | Not Available | Positive | 3225115 - 3225966 | 30407.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
