Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487831_11911 | Not Available | Positive | 3202574 - 3203320 | 28007.1 |
| putative hydrolase of the had superfamily | SAMN04487831_11912 | Not Available | Positive | 3203339 - 3204085 | 28626.3 |
| membrane-associated phospholipid phosphatase | SAMN04487831_11913 | Not Available | Negative | 3204183 - 3205133 | 35446.6 |
| dna-binding transcriptional regulator, frmr family | SAMN04487831_11914 | Not Available | Positive | 3205339 - 3205674 | 12633.2 |
| cu2+-exporting atpase | SAMN04487831_11915 | Not Available | Positive | 3205727 - 3208339 | 92272.1 |
| adp-ribose pyrophosphatase yjhb, nudix family | SAMN04487831_11916 | Not Available | Positive | 3208387 - 3208875 | 18649.0 |
| alanine or glycine:cation symporter, agcs family | SAMN04487831_11917 | Not Available | Negative | 3208948 - 3210483 | 55323.3 |
| uncharacterized membrane-anchored protein yitt, contains duf161 and duf2179 domains | SAMN04487831_11918 | Not Available | Positive | 3210665 - 3211516 | 30931.6 |
| nad+ synthase (glutamine-hydrolysing) | SAMN04487831_11919 | Not Available | Positive | 3211615 - 3213531 | 71024.1 |
| uncharacterized conserved protein, circularly permuted atpgrasp superfamily | SAMN04487831_11920 | Not Available | Positive | 3213648 - 3215006 | 51642.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
