Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487831_11830 | Not Available | Negative | 3189316 - 3190851 | 54728.9 |
| hydrogenase nickel incorporation protein hypb | SAMN04487831_11831 | Not Available | Negative | 3191083 - 3191754 | 24633.6 |
| methyltransferase domain-containing protein | SAMN04487831_11832 | Not Available | Negative | 3192141 - 3192905 | 28964.4 |
| methyltransferase domain-containing protein | SAMN04487831_11833 | Not Available | Negative | 3192908 - 3193711 | 30341.9 |
| peptide/nickel transport system atp-binding protein | SAMN04487831_11834 | Not Available | Negative | 3193727 - 3194485 | 27412.9 |
| abc-type dipeptide/oligopeptide/nickel transport system, atpase component | SAMN04487831_11835 | Not Available | Negative | 3194485 - 3195279 | 29166.6 |
| peptide/nickel transport system substrate-binding protein | SAMN04487831_11836 | Not Available | Negative | 3195281 - 3196855 | 57158.6 |
| peptide/nickel transport system permease protein | SAMN04487831_11837 | Not Available | Negative | 3196886 - 3197692 | 28622.8 |
| peptide/nickel transport system permease protein | SAMN04487831_11838 | Not Available | Negative | 3197685 - 3198629 | 35244.3 |
| predicted membrane protein | SAMN04487831_11839 | Not Available | Negative | 3198758 - 3200443 | 64818.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
