Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| secd/secf fusion protein | SAMN04487831_11820 | Not Available | Negative | 3176332 - 3178602 | 80729.0 |
| uncharacterized protein | SAMN04487831_11821 | Not Available | Negative | 3178654 - 3180039 | 52290.8 |
| six-cysteine peptide sciff | SAMN04487831_11822 | Not Available | Negative | 3180138 - 3180281 | 5032.9 |
| trigger factor | SAMN04487831_11823 | Not Available | Negative | 3180377 - 3181549 | 42904.1 |
| 4-alpha-glucanotransferase | SAMN04487831_11824 | Not Available | Negative | 3181623 - 3183137 | 58023.9 |
| carbohydrate abc transporter membrane protein 2, cut1 family (tc 3.a.1.1.-) | SAMN04487831_11825 | Not Available | Negative | 3183157 - 3183999 | 31325.9 |
| raffinose/stachyose/melibiose transport system permease protein | SAMN04487831_11826 | Not Available | Negative | 3183999 - 3184850 | 31712.6 |
| raffinose/stachyose/melibiose transport system substrate-binding protein | SAMN04487831_11827 | Not Available | Negative | 3185040 - 3186350 | 47341.4 |
| transcriptional regulator, laci family | SAMN04487831_11828 | Not Available | Negative | 3186429 - 3187439 | 37023.2 |
| hypothetical protein | SAMN04487831_11829 | Not Available | Negative | 3187636 - 3189225 | 57057.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
