Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc-2 type transport system atp-binding protein | SAMN04487831_11760 | Not Available | Positive | 3156565 - 3157284 | 26678.3 |
| transposase | SAMN04487831_1181 | Not Available | Positive | 3157772 - 3159337 | 60633.9 |
| dna replication protein dnac | SAMN04487831_1182 | Not Available | Positive | 3159352 - 3160143 | 29780.6 |
| coenzyme pqq synthesis protein d (pqqd) | SAMN04487831_1183 | Not Available | Negative | 3160188 - 3160412 | 8525.52 |
| abc-2 type transport system permease protein | SAMN04487831_1184 | Not Available | Negative | 3160429 - 3161229 | 30412.3 |
| abc-2 type transport system atp-binding protein | SAMN04487831_1185 | Not Available | Negative | 3161229 - 3162194 | 36540.4 |
| abc-2 type transport system permease protein | SAMN04487831_1186 | Not Available | Negative | 3162210 - 3163019 | 30414.2 |
| caax protease self-immunity | SAMN04487831_1187 | Not Available | Negative | 3163030 - 3163779 | 29261.7 |
| cyth domain-containing protein | SAMN04487831_1188 | Not Available | Positive | 3164028 - 3164483 | 17874.5 |
| inositol transport system substrate-binding protein | SAMN04487831_1189 | Not Available | Negative | 3164536 - 3165552 | 36130.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
